Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UBQLN4Q9NRR5 KRT17P2-201ENST00000300992 1314 ntBASIC17.46■□□□□ 0.38
UBQLN4Q9NRR5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 TSPY7P-201ENST00000431358 1114 ntBASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN4Q9NRR5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 AC096733.2-201ENST00000609937 1394 ntBASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 AC097488.1-201ENST00000507834 756 ntBASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 SLC25A1P4-201ENST00000567977 778 ntBASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 AC006333.2-201ENST00000607957 2099 ntBASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN4Q9NRR5 TNXA-203ENST00000507684 2038 ntBASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 SNORA78-201ENST00000459373 127 ntBASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN4Q9NRR5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 UNC93B2-201ENST00000285383 730 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms