Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 AL118508.1-201ENST00000613502 2345 ntBASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VCX3AQ9NNX9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3AQ9NNX9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VCX3AQ9NNX9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.71■□□□□ 0.42
VCX3AQ9NNX9 CICP6-201ENST00000457191 2729 ntBASIC17.71■□□□□ 0.42
VCX3AQ9NNX9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 PGM5P4-201ENST00000421970 445 ntBASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 AC134043.2-201ENST00000624206 2238 ntBASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3AQ9NNX9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VCX3AQ9NNX9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3AQ9NNX9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3AQ9NNX9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3AQ9NNX9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3AQ9NNX9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3AQ9NNX9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3AQ9NNX9 AL596257.1-201ENST00000641463 2694 ntBASIC17.69■□□□□ 0.42
VCX3AQ9NNX9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms