Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP29Q9HBJ7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP29Q9HBJ7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.55■□□□□ 0.72
USP29Q9HBJ7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.55■□□□□ 0.72
USP29Q9HBJ7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP29Q9HBJ7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP29Q9HBJ7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.55■□□□□ 0.72
USP29Q9HBJ7 Z98044.1-201ENST00000632503 1764 ntBASIC19.55■□□□□ 0.72
USP29Q9HBJ7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP29Q9HBJ7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 AC087499.1-201ENST00000418141 1075 ntBASIC19.53■□□□□ 0.72
USP29Q9HBJ7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 AC097493.4-201ENST00000641197 219 ntBASIC19.53■□□□□ 0.72
USP29Q9HBJ7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.53■□□□□ 0.72
USP29Q9HBJ7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 NEFHP1-201ENST00000412845 2629 ntBASIC19.52■□□□□ 0.72
USP29Q9HBJ7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 AC026471.5-201ENST00000615068 467 ntBASIC19.52■□□□□ 0.72
USP29Q9HBJ7 AL445675.2-201ENST00000620291 557 ntBASIC19.52■□□□□ 0.72
USP29Q9HBJ7 AC133561.5-201ENST00000635547 218 ntBASIC19.52■□□□□ 0.72
USP29Q9HBJ7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP29Q9HBJ7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
USP29Q9HBJ7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP29Q9HBJ7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
USP29Q9HBJ7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
USP29Q9HBJ7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 AL355075.4-201ENST00000554988 638 ntBASIC19.51■□□□□ 0.71
USP29Q9HBJ7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 AF186192.3-201ENST00000583427 947 ntBASIC19.51■□□□□ 0.71
USP29Q9HBJ7 AC083906.6-201ENST00000641366 219 ntBASIC19.51■□□□□ 0.71
USP29Q9HBJ7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP29Q9HBJ7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms