Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 TSPY20P-201ENST00000450910 630 ntBASIC18.14■□□□□ 0.49
BRF2Q9HAW0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRF2Q9HAW0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 ANO7L1-203ENST00000602586 1720 ntBASIC18.13■□□□□ 0.49
BRF2Q9HAW0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 AC011298.2-201ENST00000617989 482 ntBASIC18.13■□□□□ 0.49
BRF2Q9HAW0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 KRT8P3-201ENST00000519669 1449 ntBASIC18.13■□□□□ 0.49
BRF2Q9HAW0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
BRF2Q9HAW0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 HEIH-201ENST00000623091 1652 ntBASIC18.12■□□□□ 0.49
BRF2Q9HAW0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 AC130371.2-201ENST00000619443 611 ntBASIC18.12■□□□□ 0.49
BRF2Q9HAW0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRF2Q9HAW0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 WIZP1-201ENST00000531444 2299 ntBASIC18.11■□□□□ 0.49
BRF2Q9HAW0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRF2Q9HAW0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms