Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPTBN4Q9H254 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPTBN4Q9H254 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SPTBN4Q9H254 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SPTBN4Q9H254 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.08■□□□□ 0.48
SPTBN4Q9H254 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SPTBN4Q9H254 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SPTBN4Q9H254 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
SPTBN4Q9H254 TREX1-205ENST00000625293 1783 ntBASIC18.08■□□□□ 0.48
SPTBN4Q9H254 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 FGFR3P6-201ENST00000457012 610 ntBASIC18.07■□□□□ 0.48
SPTBN4Q9H254 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 AC005829.1-201ENST00000570002 483 ntBASIC18.07■□□□□ 0.48
SPTBN4Q9H254 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 AC008735.5-201ENST00000623544 497 ntBASIC18.07■□□□□ 0.48
SPTBN4Q9H254 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SPTBN4Q9H254 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 GAPDHP21-201ENST00000450301 1010 ntBASIC18.06■□□□□ 0.48
SPTBN4Q9H254 AL606495.2-201ENST00000605867 535 ntBASIC18.06■□□□□ 0.48
SPTBN4Q9H254 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 PRSS29P-201ENST00000440800 595 ntBASIC18.06■□□□□ 0.48
SPTBN4Q9H254 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.06■□□□□ 0.48
SPTBN4Q9H254 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPTBN4Q9H254 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 IGHGP-201ENST00000390555 1178 ntBASIC18.05■□□□□ 0.48
SPTBN4Q9H254 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 MIR4469-201ENST00000583919 79 ntBASIC18.05■□□□□ 0.48
SPTBN4Q9H254 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPTBN4Q9H254 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.04■□□□□ 0.48
SPTBN4Q9H254 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 AC011840.4-201ENST00000578471 627 ntBASIC18.04■□□□□ 0.48
SPTBN4Q9H254 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 AL078644.1-201ENST00000609881 752 ntBASIC18.04■□□□□ 0.48
SPTBN4Q9H254 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPTBN4Q9H254 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms