Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 UNC93B5-201ENST00000530315 699 ntBASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 AL121906.2-201ENST00000621597 723 ntBASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AMBRA1Q9C0C7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 MIR4651-201ENST00000582622 73 ntBASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.73■□□□□ 0.43
AMBRA1Q9C0C7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 PNMA6B-201ENST00000538162 1200 ntBASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 FEM1AP3-201ENST00000403722 1741 ntBASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.72■□□□□ 0.43
AMBRA1Q9C0C7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.71■□□□□ 0.43
AMBRA1Q9C0C7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.71■□□□□ 0.43
AMBRA1Q9C0C7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AMBRA1Q9C0C7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AMBRA1Q9C0C7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
AMBRA1Q9C0C7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AMBRA1Q9C0C7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AMBRA1Q9C0C7 AC092368.3-202ENST00000574180 1591 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms