Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 RAP2CP1-201ENST00000605103 478 ntBASIC16.28■□□□□ 0.2
NICN1Q9BSH3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.28■□□□□ 0.2
NICN1Q9BSH3 AC079598.2-202ENST00000546624 1451 ntBASIC16.28■□□□□ 0.2
NICN1Q9BSH3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NICN1Q9BSH3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 AL354751.1-201ENST00000412768 1863 ntBASIC16.27■□□□□ 0.2
NICN1Q9BSH3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 CROCCP5-201ENST00000436658 830 ntBASIC16.27■□□□□ 0.2
NICN1Q9BSH3 AC026185.1-201ENST00000445748 174 ntBASIC16.27■□□□□ 0.2
NICN1Q9BSH3 AC091874.3-201ENST00000512672 1195 ntBASIC16.27■□□□□ 0.2
NICN1Q9BSH3 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NICN1Q9BSH3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 ANO7L1-203ENST00000602586 1720 ntBASIC16.27■□□□□ 0.19
NICN1Q9BSH3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NICN1Q9BSH3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NICN1Q9BSH3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms