Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VRK1Q99986 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VRK1Q99986 AC133561.5-201ENST00000635547 218 ntBASIC16.73■□□□□ 0.27
VRK1Q99986 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VRK1Q99986 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
VRK1Q99986 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.73■□□□□ 0.27
VRK1Q99986 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.73■□□□□ 0.27
VRK1Q99986 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VRK1Q99986 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.72■□□□□ 0.27
VRK1Q99986 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.72■□□□□ 0.27
VRK1Q99986 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.72■□□□□ 0.27
VRK1Q99986 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 TUBB8P6-201ENST00000436895 1288 ntBASIC16.72■□□□□ 0.27
VRK1Q99986 YBX1P10-201ENST00000444752 975 ntBASIC16.72■□□□□ 0.27
VRK1Q99986 KSR1P1-201ENST00000446298 240 ntBASIC16.72■□□□□ 0.27
VRK1Q99986 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
VRK1Q99986 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.72■□□□□ 0.27
VRK1Q99986 AL353708.3-201ENST00000610272 989 ntBASIC16.72■□□□□ 0.27
VRK1Q99986 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VRK1Q99986 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VRK1Q99986 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
VRK1Q99986 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VRK1Q99986 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VRK1Q99986 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
VRK1Q99986 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VRK1Q99986 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
VRK1Q99986 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.71■□□□□ 0.27
VRK1Q99986 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.71■□□□□ 0.27
VRK1Q99986 NIFKP9-201ENST00000419265 221 ntBASIC16.71■□□□□ 0.27
VRK1Q99986 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.71■□□□□ 0.27
VRK1Q99986 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.71■□□□□ 0.27
VRK1Q99986 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.71■□□□□ 0.27
VRK1Q99986 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.71■□□□□ 0.27
VRK1Q99986 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK1Q99986 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.71■□□□□ 0.27
VRK1Q99986 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.71■□□□□ 0.27
VRK1Q99986 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.26
VRK1Q99986 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
VRK1Q99986 LTB4R2-202ENST00000528054 3092 ntBASIC16.71■□□□□ 0.26
VRK1Q99986 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK1Q99986 KRT16P1-201ENST00000399124 1418 ntBASIC16.7■□□□□ 0.26
VRK1Q99986 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.7■□□□□ 0.26
VRK1Q99986 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VRK1Q99986 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK1Q99986 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK1Q99986 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.7■□□□□ 0.26
VRK1Q99986 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK1Q99986 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK1Q99986 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.7■□□□□ 0.26
VRK1Q99986 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
VRK1Q99986 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VRK1Q99986 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK1Q99986 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms