Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 KRT18P23-201ENST00000435622 1283 ntBASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 AC012615.1-201ENST00000565797 1299 ntBASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 AL121772.3-201ENST00000610840 674 ntBASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CRAMP1Q96RY5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 LINC00265-3P-201ENST00000447588 903 ntBASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 AP000867.3-201ENST00000524675 377 ntBASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 AC010240.3-201ENST00000607688 395 ntBASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 AL137060.1-201ENST00000618151 2648 ntBASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CRAMP1Q96RY5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 AL512353.2-201ENST00000448759 1962 ntBASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 AC009078.2-202ENST00000463353 338 ntBASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 AC091304.2-201ENST00000564639 760 ntBASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 AL031008.1-201ENST00000619963 541 ntBASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 RCC2P3-201ENST00000418112 1537 ntBASIC23.18■■□□□ 1.3
CRAMP1Q96RY5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 TOB2P1-201ENST00000469761 992 ntBASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CRAMP1Q96RY5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 Z83836.1-201ENST00000624605 1642 ntBASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 AL160237.2-201ENST00000556165 472 ntBASIC23.16■■□□□ 1.3
CRAMP1Q96RY5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms