Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ODF3Q96PU9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.02□□□□□ -0.17
ODF3Q96PU9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 AP002982.1-201ENST00000492365 877 ntBASIC14.01□□□□□ -0.17
ODF3Q96PU9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ODF3Q96PU9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ODF3Q96PU9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
ODF3Q96PU9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ODF3Q96PU9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
ODF3Q96PU9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14□□□□□ -0.17
ODF3Q96PU9 AC004980.1-204ENST00000429707 299 ntBASIC14□□□□□ -0.17
ODF3Q96PU9 PPP1R14BP5-201ENST00000440334 435 ntBASIC14□□□□□ -0.17
ODF3Q96PU9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14□□□□□ -0.17
ODF3Q96PU9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14□□□□□ -0.17
ODF3Q96PU9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14□□□□□ -0.17
ODF3Q96PU9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14□□□□□ -0.17
ODF3Q96PU9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 HEIH-201ENST00000623091 1652 ntBASIC14□□□□□ -0.17
ODF3Q96PU9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 AC090164.3-201ENST00000610780 2143 ntBASIC14□□□□□ -0.17
ODF3Q96PU9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14□□□□□ -0.17
ODF3Q96PU9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14□□□□□ -0.17
ODF3Q96PU9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ODF3Q96PU9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ODF3Q96PU9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 KRT8P3-201ENST00000519669 1449 ntBASIC13.99□□□□□ -0.17
ODF3Q96PU9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 MYC-208ENST00000641036 567 ntBASIC13.99□□□□□ -0.17
ODF3Q96PU9 AC073648.6-201ENST00000641589 218 ntBASIC13.99□□□□□ -0.17
ODF3Q96PU9 WIZP1-201ENST00000531444 2299 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms