Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 AL691432.2-201ENST00000607222 2038 ntBASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 AP000593.1-201ENST00000393668 712 ntBASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 SLC25A6P4-201ENST00000586535 553 ntBASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NECTIN4Q96NY8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 RNF126P1-202ENST00000569893 925 ntBASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 AL121912.1-201ENST00000603683 238 ntBASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.61■□□□□ 0.73
NECTIN4Q96NY8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 KRT8P3-201ENST00000519669 1449 ntBASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 KRT8P7-201ENST00000533003 1432 ntBASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NECTIN4Q96NY8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.59■□□□□ 0.73
NECTIN4Q96NY8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms