Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.06■□□□□ 0.8
TRIM11Q96F44 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 AC026271.3-201ENST00000571884 352 ntBASIC20.06■□□□□ 0.8
TRIM11Q96F44 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM11Q96F44 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM11Q96F44 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM11Q96F44 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.05■□□□□ 0.8
TRIM11Q96F44 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM11Q96F44 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 KRT16P1-201ENST00000399124 1418 ntBASIC20.05■□□□□ 0.8
TRIM11Q96F44 KRT8P11-201ENST00000409686 1436 ntBASIC20.05■□□□□ 0.8
TRIM11Q96F44 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM11Q96F44 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM11Q96F44 MIR4651-201ENST00000582622 73 ntBASIC20.05■□□□□ 0.8
TRIM11Q96F44 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM11Q96F44 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM11Q96F44 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM11Q96F44 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM11Q96F44 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 RPPH1-201ENST00000516869 333 ntBASIC20.04■□□□□ 0.8
TRIM11Q96F44 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 RARRES2P10-201ENST00000564312 460 ntBASIC20.04■□□□□ 0.8
TRIM11Q96F44 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM11Q96F44 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM11Q96F44 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 ANO7L1-203ENST00000602586 1720 ntBASIC20.03■□□□□ 0.8
TRIM11Q96F44 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 AC004951.3-201ENST00000418645 1148 ntBASIC20.03■□□□□ 0.8
TRIM11Q96F44 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 RPS2P4-201ENST00000476944 856 ntBASIC20.03■□□□□ 0.8
TRIM11Q96F44 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM11Q96F44 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM11Q96F44 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TRIM11Q96F44 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM11Q96F44 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM11Q96F44 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM11Q96F44 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms