Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 HLA-A-209ENST00000638375 975 ntBASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC44A1Q8WWI5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC44A1Q8WWI5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
SLC44A1Q8WWI5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.02■□□□□ 0.63
SLC44A1Q8WWI5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
SLC44A1Q8WWI5 PCDHB18P-201ENST00000524813 2368 ntBASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC44A1Q8WWI5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 AC098934.4-201ENST00000564127 592 ntBASIC19■□□□□ 0.63
SLC44A1Q8WWI5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLC44A1Q8WWI5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 AL162741.1-201ENST00000565563 1558 ntBASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 ID1-201ENST00000376105 1233 ntBASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms