Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 AC008622.2-201ENST00000617006 1229 ntBASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 TREX1-205ENST00000625293 1783 ntBASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.67■□□□□ 0.74
SH3RF2Q8TEC5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 UPK3BP1-201ENST00000428678 509 ntBASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 KRT18P38-201ENST00000449496 1282 ntBASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 AL671277.2-201ENST00000458060 996 ntBASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 NEK4P2-201ENST00000580004 1012 ntBASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.66■□□□□ 0.74
SH3RF2Q8TEC5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 AC116562.4-201ENST00000641316 2276 ntBASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 CR769767.2-201ENST00000622735 460 ntBASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3RF2Q8TEC5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.64■□□□□ 0.74
SH3RF2Q8TEC5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3RF2Q8TEC5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.64■□□□□ 0.74
SH3RF2Q8TEC5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3RF2Q8TEC5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 GCSHP2-201ENST00000560971 527 ntBASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms