Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 YBX1P2-201ENST00000489612 999 ntBASIC19.18■□□□□ 0.66
CHD5Q8TDI0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 MIR3180-5-201ENST00000583743 153 ntBASIC19.17■□□□□ 0.66
CHD5Q8TDI0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 KRT8P32-201ENST00000512863 1461 ntBASIC19.17■□□□□ 0.66
CHD5Q8TDI0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD5Q8TDI0 HOXB1-202ENST00000577092 1414 ntBASIC19.17■□□□□ 0.66
CHD5Q8TDI0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 CROCCP3-202ENST00000420820 1947 ntBASIC19.16■□□□□ 0.66
CHD5Q8TDI0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD5Q8TDI0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 KRT18P21-201ENST00000515767 1272 ntBASIC19.15■□□□□ 0.66
CHD5Q8TDI0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 AC010203.1-204ENST00000548782 407 ntBASIC19.15■□□□□ 0.66
CHD5Q8TDI0 AC141257.4-201ENST00000634557 245 ntBASIC19.15■□□□□ 0.66
CHD5Q8TDI0 AC136944.6-201ENST00000634818 245 ntBASIC19.15■□□□□ 0.66
CHD5Q8TDI0 ANO7L1-203ENST00000602586 1720 ntBASIC19.15■□□□□ 0.66
CHD5Q8TDI0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 SEC1P-202ENST00000473944 940 ntBASIC19.15■□□□□ 0.66
CHD5Q8TDI0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD5Q8TDI0 AL109659.2-201ENST00000606809 1674 ntBASIC19.15■□□□□ 0.66
CHD5Q8TDI0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD5Q8TDI0 AC093525.10-201ENST00000625130 1569 ntBASIC19.14■□□□□ 0.66
CHD5Q8TDI0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD5Q8TDI0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms