Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 AC092368.3-202ENST00000574180 1591 ntBASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 AIRN-201ENST00000601203 4374 ntBASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 HEIH-201ENST00000623091 1652 ntBASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4Y2Q8TD47 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 AP000997.3-201ENST00000623333 2250 ntBASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 AC008764.6-201ENST00000595909 2069 ntBASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 GUSBP6-202ENST00000438529 1198 ntBASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 PNMA6B-201ENST00000538162 1200 ntBASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 AC142086.2-201ENST00000569753 217 ntBASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 MIR4758-201ENST00000577688 71 ntBASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 AC060766.5-201ENST00000590539 871 ntBASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4Y2Q8TD47 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPS4Y2Q8TD47 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
RPS4Y2Q8TD47 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4Y2Q8TD47 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RPS4Y2Q8TD47 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPS4Y2Q8TD47 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPS4Y2Q8TD47 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPS4Y2Q8TD47 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RPS4Y2Q8TD47 MTMR9LP-203ENST00000426597 1545 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms