Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC28.3■■■□□ 2.12
CCER1Q8TC90 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC28.3■■■□□ 2.12
CCER1Q8TC90 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.3■■■□□ 2.12
CCER1Q8TC90 AC104771.1-201ENST00000603335 964 ntBASIC28.3■■■□□ 2.12
CCER1Q8TC90 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCER1Q8TC90 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
CCER1Q8TC90 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCER1Q8TC90 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC28.3■■■□□ 2.12
CCER1Q8TC90 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC28.29■■■□□ 2.12
CCER1Q8TC90 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC28.29■■■□□ 2.12
CCER1Q8TC90 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC28.29■■■□□ 2.12
CCER1Q8TC90 POM121L13P-201ENST00000422362 380 ntBASIC28.29■■■□□ 2.12
CCER1Q8TC90 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.29■■■□□ 2.12
CCER1Q8TC90 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 AC083906.6-201ENST00000641366 219 ntBASIC28.29■■■□□ 2.12
CCER1Q8TC90 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
CCER1Q8TC90 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC28.29■■■□□ 2.12
CCER1Q8TC90 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCER1Q8TC90 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCER1Q8TC90 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCER1Q8TC90 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCER1Q8TC90 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCER1Q8TC90 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCER1Q8TC90 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCER1Q8TC90 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 HLA-A-209ENST00000638375 975 ntBASIC28.28■■■□□ 2.12
CCER1Q8TC90 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCER1Q8TC90 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCER1Q8TC90 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
CCER1Q8TC90 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC28.27■■■□□ 2.12
CCER1Q8TC90 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC28.27■■■□□ 2.12
CCER1Q8TC90 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
CCER1Q8TC90 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CCER1Q8TC90 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC28.27■■■□□ 2.12
CCER1Q8TC90 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
CCER1Q8TC90 AC142086.2-201ENST00000569753 217 ntBASIC28.27■■■□□ 2.12
CCER1Q8TC90 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
CCER1Q8TC90 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 BICD1-207ENST00000551848 1962 ntBASIC28.27■■■□□ 2.12
CCER1Q8TC90 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCER1Q8TC90 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC28.27■■■□□ 2.12
CCER1Q8TC90 GAS2L1P1-201ENST00000420145 1480 ntBASIC28.27■■■□□ 2.12
CCER1Q8TC90 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC28.26■■■□□ 2.12
CCER1Q8TC90 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC28.26■■■□□ 2.11
CCER1Q8TC90 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CCER1Q8TC90 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC28.25■■■□□ 2.11
CCER1Q8TC90 AL133373.2-201ENST00000623187 2828 ntBASIC28.25■■■□□ 2.11
CCER1Q8TC90 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC28.25■■■□□ 2.11
CCER1Q8TC90 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 TSPY23P-201ENST00000440136 739 ntBASIC28.25■■■□□ 2.11
CCER1Q8TC90 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms