Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMARCC2Q8TAQ2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 AL512353.2-201ENST00000448759 1962 ntBASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 UNC93B2-201ENST00000285383 730 ntBASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 RBM17P1-201ENST00000453646 1190 ntBASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 FSCN1P1-201ENST00000568912 1481 ntBASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMARCC2Q8TAQ2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SMARCC2Q8TAQ2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 MIR6786-201ENST00000616843 113 ntBASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMARCC2Q8TAQ2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 B3GAT3P1-201ENST00000471720 806 ntBASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 Z98044.1-201ENST00000632503 1764 ntBASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMARCC2Q8TAQ2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMARCC2Q8TAQ2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms