Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
EFCAB3Q8N7B9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 AC012618.2-201ENST00000428058 849 ntBASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 PHGDH-210ENST00000641115 1638 ntBASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 AL390961.4-201ENST00000623958 2535 ntBASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 AC006333.2-201ENST00000607957 2099 ntBASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFCAB3Q8N7B9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFCAB3Q8N7B9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
EFCAB3Q8N7B9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFCAB3Q8N7B9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFCAB3Q8N7B9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFCAB3Q8N7B9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFCAB3Q8N7B9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFCAB3Q8N7B9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
EFCAB3Q8N7B9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
EFCAB3Q8N7B9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
EFCAB3Q8N7B9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms