Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 RNF152P1-201ENST00000397754 604 ntBASIC29.64■■■□□ 2.34
VPS8Q8N3P4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 KRT18P38-201ENST00000449496 1282 ntBASIC29.64■■■□□ 2.34
VPS8Q8N3P4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 AC083906.6-201ENST00000641366 219 ntBASIC29.64■■■□□ 2.34
VPS8Q8N3P4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC29.64■■■□□ 2.34
VPS8Q8N3P4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
VPS8Q8N3P4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
VPS8Q8N3P4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
VPS8Q8N3P4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC29.64■■■□□ 2.33
VPS8Q8N3P4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
VPS8Q8N3P4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC29.62■■■□□ 2.33
VPS8Q8N3P4 SEC1P-202ENST00000473944 940 ntBASIC29.62■■■□□ 2.33
VPS8Q8N3P4 GCSHP2-201ENST00000560971 527 ntBASIC29.62■■■□□ 2.33
VPS8Q8N3P4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
VPS8Q8N3P4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 TSPY5P-201ENST00000426936 936 ntBASIC29.6■■■□□ 2.33
VPS8Q8N3P4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 NTF6B-201ENST00000591913 560 ntBASIC29.6■■■□□ 2.33
VPS8Q8N3P4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
VPS8Q8N3P4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 AL359075.1-203ENST00000462729 1002 ntBASIC29.59■■■□□ 2.33
VPS8Q8N3P4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms