Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 CROCCP3-202ENST00000420820 1947 ntBASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 AL158047.1-201ENST00000445918 881 ntBASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 CR392000.1-201ENST00000624770 1228 ntBASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE9Q8IYJ1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CPNE9Q8IYJ1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 KRT16P1-201ENST00000399124 1418 ntBASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 GCSHP5-201ENST00000443090 522 ntBASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE9Q8IYJ1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE9Q8IYJ1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 RCC2P6-201ENST00000526625 1557 ntBASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 AC073195.1-201ENST00000607241 877 ntBASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms