Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H3Q8IXZ2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H3Q8IXZ2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 AC090164.3-201ENST00000610780 2143 ntBASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 REXO1L10P-201ENST00000615707 1290 ntBASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 AC008622.2-201ENST00000617006 1229 ntBASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 REXO1L12P-201ENST00000622156 912 ntBASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ZC3H3Q8IXZ2 AC005082.1-201ENST00000413042 2259 ntBASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H3Q8IXZ2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 AP001412.1-201ENST00000608405 714 ntBASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 AC073592.3-201ENST00000625118 1834 ntBASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 RNF165-205ENST00000588679 2904 ntBASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.57■□□□□ 0.88
ZC3H3Q8IXZ2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.56■□□□□ 0.88
ZC3H3Q8IXZ2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms