Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 NKILA-202ENST00000614771 2598 ntBASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 AL118508.1-201ENST00000613502 2345 ntBASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD2Q8IV50 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 HCG11-201ENST00000411553 5696 ntBASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 SLC7A5P1-201ENST00000568957 537 ntBASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 AL031432.3-201ENST00000607698 485 ntBASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 AC011676.5-201ENST00000624864 2660 ntBASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD2Q8IV50 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 AC087633.2-202ENST00000565166 1439 ntBASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 SLC25A6P5-201ENST00000435663 894 ntBASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 CDV3P1-201ENST00000471403 739 ntBASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms