Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.82■■□□□ 1.4
COL23A1Q86Y22 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL23A1Q86Y22 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 AC243591.1-201ENST00000452967 1364 ntBASIC23.81■■□□□ 1.4
COL23A1Q86Y22 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 RN7SL606P-201ENST00000472779 293 ntBASIC23.81■■□□□ 1.4
COL23A1Q86Y22 AC009065.1-201ENST00000564055 1225 ntBASIC23.81■■□□□ 1.4
COL23A1Q86Y22 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.81■■□□□ 1.4
COL23A1Q86Y22 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 PMS2P7-201ENST00000506558 1336 ntBASIC23.81■■□□□ 1.4
COL23A1Q86Y22 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
COL23A1Q86Y22 AC026310.3-201ENST00000625186 2373 ntBASIC23.8■■□□□ 1.4
COL23A1Q86Y22 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 RNPS1P1-201ENST00000507437 918 ntBASIC23.8■■□□□ 1.4
COL23A1Q86Y22 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 AC010240.3-201ENST00000607688 395 ntBASIC23.8■■□□□ 1.4
COL23A1Q86Y22 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 AC124864.1-201ENST00000623408 392 ntBASIC23.8■■□□□ 1.4
COL23A1Q86Y22 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.8■■□□□ 1.4
COL23A1Q86Y22 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.8■■□□□ 1.4
COL23A1Q86Y22 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 KRT18P67-201ENST00000432816 1264 ntBASIC23.79■■□□□ 1.4
COL23A1Q86Y22 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 SDHAP1-207ENST00000440850 2000 ntBASIC23.79■■□□□ 1.4
COL23A1Q86Y22 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL23A1Q86Y22 ZNF815P-204ENST00000434898 1737 ntBASIC23.79■■□□□ 1.4
COL23A1Q86Y22 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 KRT8P3-201ENST00000519669 1449 ntBASIC23.78■■□□□ 1.4
COL23A1Q86Y22 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 BX842568.4-201ENST00000421222 227 ntBASIC23.78■■□□□ 1.4
COL23A1Q86Y22 HMGN1P19-201ENST00000436976 333 ntBASIC23.78■■□□□ 1.4
COL23A1Q86Y22 AC104390.1-201ENST00000555663 520 ntBASIC23.78■■□□□ 1.4
COL23A1Q86Y22 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 GPR32P1-201ENST00000601788 811 ntBASIC23.78■■□□□ 1.4
COL23A1Q86Y22 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 CLDN5-201ENST00000403084 2357 ntBASIC23.78■■□□□ 1.4
COL23A1Q86Y22 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL23A1Q86Y22 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.77■■□□□ 1.4
COL23A1Q86Y22 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 MIR940-201ENST00000401276 94 ntBASIC23.77■■□□□ 1.4
COL23A1Q86Y22 KRT18P23-201ENST00000435622 1283 ntBASIC23.77■■□□□ 1.4
COL23A1Q86Y22 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms