Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 NFIC-211ENST00000641145 8399 ntBASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CHMP1BQ7LBR1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 NUDT16P1-203ENST00000513809 620 ntBASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHMP1BQ7LBR1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 AL445675.2-201ENST00000620291 557 ntBASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 AC073912.3-201ENST00000624414 853 ntBASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP1BQ7LBR1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP1BQ7LBR1 REXO1L12P-201ENST00000622156 912 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms