Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 AC091390.4-202ENST00000476426 537 ntBASIC21.41■■□□□ 1.02
SHC4Q6S5L8 RPPH1-201ENST00000516869 333 ntBASIC21.41■■□□□ 1.02
SHC4Q6S5L8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 AC135050.7-201ENST00000624508 2218 ntBASIC21.41■■□□□ 1.02
SHC4Q6S5L8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC4Q6S5L8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 HEIH-201ENST00000623091 1652 ntBASIC21.4■■□□□ 1.02
SHC4Q6S5L8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 AC008040.2-201ENST00000461049 708 ntBASIC21.4■■□□□ 1.02
SHC4Q6S5L8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.4■■□□□ 1.02
SHC4Q6S5L8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHC4Q6S5L8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.39■■□□□ 1.02
SHC4Q6S5L8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
SHC4Q6S5L8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.39■■□□□ 1.02
SHC4Q6S5L8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHC4Q6S5L8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHC4Q6S5L8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
SHC4Q6S5L8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.39■■□□□ 1.02
SHC4Q6S5L8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 KSR1P1-201ENST00000446298 240 ntBASIC21.39■■□□□ 1.01
SHC4Q6S5L8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 AP002982.1-201ENST00000492365 877 ntBASIC21.39■■□□□ 1.01
SHC4Q6S5L8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 MTMR9LP-203ENST00000426597 1545 ntBASIC21.39■■□□□ 1.01
SHC4Q6S5L8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.39■■□□□ 1.01
SHC4Q6S5L8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.38■■□□□ 1.01
SHC4Q6S5L8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 AC068587.9-201ENST00000641814 219 ntBASIC21.38■■□□□ 1.01
SHC4Q6S5L8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHC4Q6S5L8 BICD1-207ENST00000551848 1962 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms