Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNKSR3Q6P9H4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CNKSR3Q6P9H4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CNKSR3Q6P9H4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNKSR3Q6P9H4 AL109659.2-201ENST00000606809 1674 ntBASIC20.39■□□□□ 0.86
CNKSR3Q6P9H4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 AC104390.1-201ENST00000555663 520 ntBASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 AC010240.3-201ENST00000607688 395 ntBASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.39■□□□□ 0.85
CNKSR3Q6P9H4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 HOXB1-202ENST00000577092 1414 ntBASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNKSR3Q6P9H4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 AP003733.1-201ENST00000491725 852 ntBASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 AC106795.1-205ENST00000512851 1056 ntBASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 AC005332.3-201ENST00000589904 676 ntBASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 AC023511.2-201ENST00000618803 211 ntBASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 TCF3P1-201ENST00000423021 1937 ntBASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNKSR3Q6P9H4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 AP002469.2-201ENST00000531724 424 ntBASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 AC074051.2-201ENST00000565115 352 ntBASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 AL390719.2-201ENST00000606993 987 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms