Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 AC005332.1-201ENST00000577698 1310 ntBASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 STARP1-201ENST00000397973 869 ntBASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARFGEF3Q5TH69 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 UPK3BP1-201ENST00000428678 509 ntBASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 AC087388.1-201ENST00000571370 1112 ntBASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARFGEF3Q5TH69 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 CR769767.2-201ENST00000622735 460 ntBASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 AL358472.4-201ENST00000633140 710 ntBASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 GPAT2P1-201ENST00000444924 1672 ntBASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 AP000550.4-202ENST00000639755 178 ntBASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.09■□□□□ 0.17
ARFGEF3Q5TH69 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.08■□□□□ 0.17
ARFGEF3Q5TH69 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ARFGEF3Q5TH69 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
ARFGEF3Q5TH69 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ARFGEF3Q5TH69 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ARFGEF3Q5TH69 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ARFGEF3Q5TH69 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms