Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 AL591684.3-201ENST00000605187 298 ntBASIC16.46■□□□□ 0.23
LRRK2Q5S007 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
LRRK2Q5S007 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRRK2Q5S007 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.46■□□□□ 0.22
LRRK2Q5S007 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.46■□□□□ 0.22
LRRK2Q5S007 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRRK2Q5S007 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.46■□□□□ 0.22
LRRK2Q5S007 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.46■□□□□ 0.22
LRRK2Q5S007 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.46■□□□□ 0.22
LRRK2Q5S007 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.46■□□□□ 0.22
LRRK2Q5S007 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 AF106564.1-201ENST00000607058 2553 ntBASIC16.45■□□□□ 0.22
LRRK2Q5S007 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRK2Q5S007 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRK2Q5S007 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
LRRK2Q5S007 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.45■□□□□ 0.22
LRRK2Q5S007 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRK2Q5S007 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 KRT18P28-201ENST00000453838 1332 ntBASIC16.45■□□□□ 0.22
LRRK2Q5S007 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRK2Q5S007 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRK2Q5S007 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 IGHGP-201ENST00000390555 1178 ntBASIC16.44■□□□□ 0.22
LRRK2Q5S007 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 RBM17P3-201ENST00000417687 1192 ntBASIC16.44■□□□□ 0.22
LRRK2Q5S007 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.44■□□□□ 0.22
LRRK2Q5S007 KRT18P3-201ENST00000451602 1288 ntBASIC16.44■□□□□ 0.22
LRRK2Q5S007 MINOS1P3-201ENST00000457048 203 ntBASIC16.44■□□□□ 0.22
LRRK2Q5S007 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 AC034105.1-201ENST00000563488 319 ntBASIC16.44■□□□□ 0.22
LRRK2Q5S007 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRK2Q5S007 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRRK2Q5S007 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 GUSBP5-202ENST00000510805 1989 ntBASIC16.43■□□□□ 0.22
LRRK2Q5S007 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 HLA-J-201ENST00000462773 1622 ntBASIC16.43■□□□□ 0.22
LRRK2Q5S007 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRK2Q5S007 AL023284.2-201ENST00000405850 579 ntBASIC16.43■□□□□ 0.22
LRRK2Q5S007 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 SART3-203ENST00000546611 1184 ntBASIC16.43■□□□□ 0.22
LRRK2Q5S007 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms