Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
LINC01554Q52M75 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 POLL-206ENST00000370172 2308 ntTSL 2 BASIC9.54□□□□□ -0.88
LINC01554Q52M75 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 LINC02228-204ENST00000642115 2962 ntBASIC9.54□□□□□ -0.88
LINC01554Q52M75 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC9.54□□□□□ -0.88
LINC01554Q52M75 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LINC01554Q52M75 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 OXCT2P1-201ENST00000447263 1535 ntBASIC9.53□□□□□ -0.88
LINC01554Q52M75 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 AP004607.7-201ENST00000527152 1677 ntBASIC9.53□□□□□ -0.88
LINC01554Q52M75 SRD5A1P1-201ENST00000442297 786 ntBASIC9.53□□□□□ -0.88
LINC01554Q52M75 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 AL356740.2-201ENST00000601559 647 ntBASIC9.53□□□□□ -0.88
LINC01554Q52M75 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 AC073314.1-201ENST00000568729 2216 ntBASIC9.53□□□□□ -0.88
LINC01554Q52M75 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC9.53□□□□□ -0.88
LINC01554Q52M75 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC01554Q52M75 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC9.52□□□□□ -0.88
LINC01554Q52M75 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC9.52□□□□□ -0.88
LINC01554Q52M75 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
LINC01554Q52M75 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
LINC01554Q52M75 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC9.52□□□□□ -0.88
LINC01554Q52M75 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
LINC01554Q52M75 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 AL138781.2-201ENST00000617896 1843 ntBASIC9.52□□□□□ -0.89
LINC01554Q52M75 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 CICP14-201ENST00000629111 2732 ntBASIC9.52□□□□□ -0.89
LINC01554Q52M75 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 UNC93B8-201ENST00000511903 705 ntBASIC9.52□□□□□ -0.89
LINC01554Q52M75 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 AC068587.7-201ENST00000641602 218 ntBASIC9.52□□□□□ -0.89
LINC01554Q52M75 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms