Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KHDC1Q4VXA5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 KSR1P1-201ENST00000446298 240 ntBASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 CR392000.1-201ENST00000624770 1228 ntBASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KHDC1Q4VXA5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 AL445675.2-201ENST00000620291 557 ntBASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KHDC1Q4VXA5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 AC079598.2-202ENST00000546624 1451 ntBASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 MIR4497-201ENST00000583208 89 ntBASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 AP000997.3-201ENST00000623333 2250 ntBASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms