Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 AC083880.1-201ENST00000608266 535 ntBASIC14.51□□□□□ -0.09
HIST1H1AQ02539 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 AC133041.1-202ENST00000642053 222 ntBASIC14.51□□□□□ -0.09
HIST1H1AQ02539 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.51□□□□□ -0.09
HIST1H1AQ02539 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 AL133373.2-201ENST00000623187 2828 ntBASIC14.51□□□□□ -0.09
HIST1H1AQ02539 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H1AQ02539 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 ZNF815P-204ENST00000434898 1737 ntBASIC14.5□□□□□ -0.09
HIST1H1AQ02539 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 YBX1P10-201ENST00000444752 975 ntBASIC14.5□□□□□ -0.09
HIST1H1AQ02539 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HIST1H1AQ02539 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 AC069152.1-201ENST00000438030 544 ntBASIC14.49□□□□□ -0.09
HIST1H1AQ02539 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.49□□□□□ -0.09
HIST1H1AQ02539 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H1AQ02539 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms