Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.14■□□□□ 0.33
RPS4XP62701 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.14■□□□□ 0.33
RPS4XP62701 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.14■□□□□ 0.33
RPS4XP62701 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.14■□□□□ 0.33
RPS4XP62701 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4XP62701 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4XP62701 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4XP62701 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4XP62701 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.14■□□□□ 0.33
RPS4XP62701 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4XP62701 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4XP62701 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4XP62701 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4XP62701 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RPS4XP62701 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.13■□□□□ 0.33
RPS4XP62701 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.13■□□□□ 0.33
RPS4XP62701 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.13■□□□□ 0.33
RPS4XP62701 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RPS4XP62701 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.13■□□□□ 0.33
RPS4XP62701 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPS4XP62701 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.13■□□□□ 0.33
RPS4XP62701 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.13■□□□□ 0.33
RPS4XP62701 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.13■□□□□ 0.33
RPS4XP62701 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
RPS4XP62701 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 AL445675.2-201ENST00000620291 557 ntBASIC17.13■□□□□ 0.33
RPS4XP62701 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.13■□□□□ 0.33
RPS4XP62701 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RPS4XP62701 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RPS4XP62701 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.13■□□□□ 0.33
RPS4XP62701 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
RPS4XP62701 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4XP62701 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPS4XP62701 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS4XP62701 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RPS4XP62701 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS4XP62701 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS4XP62701 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS4XP62701 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS4XP62701 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.12■□□□□ 0.33
RPS4XP62701 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RPS4XP62701 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS4XP62701 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS4XP62701 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
RPS4XP62701 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RPS4XP62701 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RPS4XP62701 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4XP62701 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RPS4XP62701 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.11■□□□□ 0.33
RPS4XP62701 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RPS4XP62701 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.11■□□□□ 0.33
RPS4XP62701 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPS4XP62701 WIZP1-201ENST00000531444 2299 ntBASIC17.11■□□□□ 0.33
RPS4XP62701 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RPS4XP62701 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPS4XP62701 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS4XP62701 MIR1224-201ENST00000408193 85 ntBASIC17.11■□□□□ 0.33
RPS4XP62701 AL353807.1-201ENST00000427475 662 ntBASIC17.11■□□□□ 0.33
RPS4XP62701 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
RPS4XP62701 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms