Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
ZC3H6P61129 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ZC3H6P61129 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ZC3H6P61129 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
ZC3H6P61129 AC007375.3-201ENST00000600936 2314 ntBASIC25.32■■□□□ 1.64
ZC3H6P61129 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3H6P61129 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3H6P61129 KRT8P3-201ENST00000519669 1449 ntBASIC25.32■■□□□ 1.64
ZC3H6P61129 LINC00167-201ENST00000530583 1419 ntBASIC25.32■■□□□ 1.64
ZC3H6P61129 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3H6P61129 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3H6P61129 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3H6P61129 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC25.32■■□□□ 1.64
ZC3H6P61129 AC104819.1-201ENST00000504587 486 ntBASIC25.32■■□□□ 1.64
ZC3H6P61129 AC074051.2-201ENST00000565115 352 ntBASIC25.32■■□□□ 1.64
ZC3H6P61129 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC25.32■■□□□ 1.64
ZC3H6P61129 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3H6P61129 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.32■■□□□ 1.64
ZC3H6P61129 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3H6P61129 AC099778.1-201ENST00000568593 1911 ntBASIC25.31■■□□□ 1.64
ZC3H6P61129 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZC3H6P61129 DFFB-203ENST00000341385 572 ntTSL 5 BASIC25.31■■□□□ 1.64
ZC3H6P61129 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.31■■□□□ 1.64
ZC3H6P61129 AP000593.1-201ENST00000393668 712 ntBASIC25.31■■□□□ 1.64
ZC3H6P61129 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC25.31■■□□□ 1.64
ZC3H6P61129 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC25.31■■□□□ 1.64
ZC3H6P61129 AC005332.3-201ENST00000589904 676 ntBASIC25.31■■□□□ 1.64
ZC3H6P61129 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
ZC3H6P61129 AL671883.3-201ENST00000603274 991 ntBASIC25.31■■□□□ 1.64
ZC3H6P61129 AL121912.1-201ENST00000603683 238 ntBASIC25.31■■□□□ 1.64
ZC3H6P61129 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZC3H6P61129 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC25.31■■□□□ 1.64
ZC3H6P61129 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.31■■□□□ 1.64
ZC3H6P61129 AC092667.1-201ENST00000434301 2586 ntBASIC25.31■■□□□ 1.64
ZC3H6P61129 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
ZC3H6P61129 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ZC3H6P61129 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC25.3■■□□□ 1.64
ZC3H6P61129 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC25.3■■□□□ 1.64
ZC3H6P61129 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
ZC3H6P61129 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC25.3■■□□□ 1.64
ZC3H6P61129 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC25.3■■□□□ 1.64
ZC3H6P61129 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
ZC3H6P61129 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
ZC3H6P61129 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3H6P61129 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
ZC3H6P61129 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
ZC3H6P61129 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3H6P61129 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3H6P61129 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3H6P61129 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC25.29■■□□□ 1.64
ZC3H6P61129 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC25.29■■□□□ 1.64
ZC3H6P61129 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.29■■□□□ 1.64
ZC3H6P61129 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
ZC3H6P61129 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3H6P61129 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3H6P61129 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
ZC3H6P61129 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3H6P61129 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
ZC3H6P61129 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 BAALC-202ENST00000306391 243 ntTSL 5 BASIC25.28■■□□□ 1.64
ZC3H6P61129 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 BAALC-204ENST00000330955 222 ntTSL 5 BASIC25.28■■□□□ 1.64
ZC3H6P61129 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC25.28■■□□□ 1.64
ZC3H6P61129 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC25.28■■□□□ 1.64
ZC3H6P61129 TPM1-218ENST00000559281 851 ntTSL 5 BASIC25.28■■□□□ 1.64
ZC3H6P61129 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 AC099336.1-202ENST00000602961 463 ntBASIC25.28■■□□□ 1.64
ZC3H6P61129 AL353801.3-201ENST00000609898 542 ntBASIC25.28■■□□□ 1.64
ZC3H6P61129 IGHV3-41-201ENST00000613121 348 ntBASIC25.28■■□□□ 1.64
ZC3H6P61129 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 HLA-A-201ENST00000376802 1334 ntBASIC25.28■■□□□ 1.64
ZC3H6P61129 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms