Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PER3P56645 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PER3P56645 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.53■□□□□ 0.4
PER3P56645 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.53■□□□□ 0.4
PER3P56645 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.53■□□□□ 0.4
PER3P56645 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.53■□□□□ 0.4
PER3P56645 TPM4P1-201ENST00000436100 807 ntBASIC17.53■□□□□ 0.4
PER3P56645 CCR12P-201ENST00000446203 998 ntBASIC17.53■□□□□ 0.4
PER3P56645 FAM207BP-201ENST00000447172 505 ntBASIC17.53■□□□□ 0.4
PER3P56645 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.53■□□□□ 0.4
PER3P56645 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PER3P56645 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.53■□□□□ 0.4
PER3P56645 KRT126P-201ENST00000549467 1181 ntBASIC17.53■□□□□ 0.4
PER3P56645 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 AP000550.4-202ENST00000639755 178 ntBASIC17.53■□□□□ 0.4
PER3P56645 AC116562.4-202ENST00000641738 218 ntBASIC17.53■□□□□ 0.4
PER3P56645 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.53■□□□□ 0.4
PER3P56645 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PER3P56645 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PER3P56645 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PER3P56645 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.52■□□□□ 0.4
PER3P56645 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
PER3P56645 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.52■□□□□ 0.4
PER3P56645 FAM8A6P-201ENST00000407496 1135 ntBASIC17.52■□□□□ 0.4
PER3P56645 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.52■□□□□ 0.4
PER3P56645 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.52■□□□□ 0.4
PER3P56645 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PER3P56645 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PER3P56645 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.39
PER3P56645 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PER3P56645 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PER3P56645 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
PER3P56645 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.52■□□□□ 0.39
PER3P56645 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.52■□□□□ 0.39
PER3P56645 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PER3P56645 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.51■□□□□ 0.39
PER3P56645 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 YBX1P10-201ENST00000444752 975 ntBASIC17.51■□□□□ 0.39
PER3P56645 TFP1-202ENST00000475455 1573 ntBASIC17.51■□□□□ 0.39
PER3P56645 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.51■□□□□ 0.39
PER3P56645 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.51■□□□□ 0.39
PER3P56645 SLC25A1P4-201ENST00000567977 778 ntBASIC17.51■□□□□ 0.39
PER3P56645 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.51■□□□□ 0.39
PER3P56645 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.51■□□□□ 0.39
PER3P56645 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.51■□□□□ 0.39
PER3P56645 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PER3P56645 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PER3P56645 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PER3P56645 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PER3P56645 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PER3P56645 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.5■□□□□ 0.39
PER3P56645 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PER3P56645 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.5■□□□□ 0.39
PER3P56645 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PER3P56645 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
PER3P56645 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.5■□□□□ 0.39
PER3P56645 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PER3P56645 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PER3P56645 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.5■□□□□ 0.39
PER3P56645 KRT18P48-201ENST00000434763 852 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms