Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLCN2P51788 AC093525.10-201ENST00000625130 1569 ntBASIC18.35■□□□□ 0.53
CLCN2P51788 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLCN2P51788 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLCN2P51788 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN2P51788 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN2P51788 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CLCN2P51788 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.35■□□□□ 0.53
CLCN2P51788 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN2P51788 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCN2P51788 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCN2P51788 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN2P51788 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 AP006587.1-201ENST00000534129 1502 ntBASIC18.34■□□□□ 0.53
CLCN2P51788 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN2P51788 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCN2P51788 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN2P51788 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCN2P51788 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN2P51788 KRT16P5-201ENST00000455284 522 ntBASIC18.34■□□□□ 0.53
CLCN2P51788 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN2P51788 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN2P51788 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.34■□□□□ 0.53
CLCN2P51788 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLCN2P51788 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLCN2P51788 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN2P51788 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN2P51788 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 TFP1-202ENST00000475455 1573 ntBASIC18.34■□□□□ 0.53
CLCN2P51788 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN2P51788 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLCN2P51788 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN2P51788 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CLCN2P51788 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.33■□□□□ 0.53
CLCN2P51788 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.33■□□□□ 0.53
CLCN2P51788 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CLCN2P51788 AL135905.2-201ENST00000584934 1404 ntBASIC18.33■□□□□ 0.53
CLCN2P51788 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CLCN2P51788 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.33■□□□□ 0.53
CLCN2P51788 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLCN2P51788 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN2P51788 AL031598.1-201ENST00000561511 1773 ntBASIC18.33■□□□□ 0.53
CLCN2P51788 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN2P51788 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLCN2P51788 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLCN2P51788 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCN2P51788 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLCN2P51788 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN2P51788 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCN2P51788 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN2P51788 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLCN2P51788 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN2P51788 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN2P51788 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN2P51788 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CLCN2P51788 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLCN2P51788 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN2P51788 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.33■□□□□ 0.52
CLCN2P51788 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLCN2P51788 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN2P51788 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN2P51788 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN2P51788 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLCN2P51788 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN2P51788 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN2P51788 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN2P51788 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN2P51788 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN2P51788 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLCN2P51788 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCN2P51788 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLCN2P51788 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms