Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KNTC1P50748 MRPL3P1-201ENST00000400109 1033 ntBASIC18.01■□□□□ 0.47
KNTC1P50748 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.01■□□□□ 0.47
KNTC1P50748 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.01■□□□□ 0.47
KNTC1P50748 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.01■□□□□ 0.47
KNTC1P50748 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.01■□□□□ 0.47
KNTC1P50748 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KNTC1P50748 AP000867.3-201ENST00000524675 377 ntBASIC18.01■□□□□ 0.47
KNTC1P50748 AL031008.1-201ENST00000619963 541 ntBASIC18.01■□□□□ 0.47
KNTC1P50748 AL157888.1-201ENST00000631930 593 ntBASIC18.01■□□□□ 0.47
KNTC1P50748 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
KNTC1P50748 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KNTC1P50748 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KNTC1P50748 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KNTC1P50748 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.01■□□□□ 0.47
KNTC1P50748 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KNTC1P50748 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KNTC1P50748 TOB2P1-201ENST00000469761 992 ntBASIC18■□□□□ 0.47
KNTC1P50748 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18■□□□□ 0.47
KNTC1P50748 PNN-202ENST00000553331 656 ntTSL 3 BASIC18■□□□□ 0.47
KNTC1P50748 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KNTC1P50748 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KNTC1P50748 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KNTC1P50748 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
KNTC1P50748 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18■□□□□ 0.47
KNTC1P50748 AP005212.1-201ENST00000581547 1997 ntBASIC18■□□□□ 0.47
KNTC1P50748 ZNF815P-204ENST00000434898 1737 ntBASIC18■□□□□ 0.47
KNTC1P50748 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
KNTC1P50748 TSPY12P-201ENST00000421279 868 ntBASIC18■□□□□ 0.47
KNTC1P50748 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18■□□□□ 0.47
KNTC1P50748 AL136038.4-201ENST00000603606 1261 ntBASIC18■□□□□ 0.47
KNTC1P50748 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18■□□□□ 0.47
KNTC1P50748 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
KNTC1P50748 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18■□□□□ 0.47
KNTC1P50748 AC079834.2-201ENST00000609776 1949 ntBASIC18■□□□□ 0.47
KNTC1P50748 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KNTC1P50748 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
KNTC1P50748 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KNTC1P50748 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KNTC1P50748 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18■□□□□ 0.47
KNTC1P50748 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.99■□□□□ 0.47
KNTC1P50748 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.99■□□□□ 0.47
KNTC1P50748 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
KNTC1P50748 AL121912.1-201ENST00000603683 238 ntBASIC17.99■□□□□ 0.47
KNTC1P50748 AL512408.1-201ENST00000569378 2000 ntBASIC17.99■□□□□ 0.47
KNTC1P50748 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KNTC1P50748 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.99■□□□□ 0.47
KNTC1P50748 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.99■□□□□ 0.47
KNTC1P50748 LINC01711-201ENST00000598340 967 ntBASIC17.99■□□□□ 0.47
KNTC1P50748 AC024243.1-201ENST00000609234 778 ntBASIC17.99■□□□□ 0.47
KNTC1P50748 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
KNTC1P50748 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.99■□□□□ 0.47
KNTC1P50748 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
KNTC1P50748 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KNTC1P50748 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.98■□□□□ 0.47
KNTC1P50748 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 AF228730.7-201ENST00000641842 219 ntBASIC17.98■□□□□ 0.47
KNTC1P50748 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.98■□□□□ 0.47
KNTC1P50748 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.98■□□□□ 0.47
KNTC1P50748 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 AC120498.9-201ENST00000339021 3867 ntBASIC17.98■□□□□ 0.47
KNTC1P50748 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.98■□□□□ 0.47
KNTC1P50748 RNA5SP419-201ENST00000515908 135 ntBASIC17.98■□□□□ 0.47
KNTC1P50748 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.98■□□□□ 0.47
KNTC1P50748 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.98■□□□□ 0.47
KNTC1P50748 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
KNTC1P50748 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KNTC1P50748 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.98■□□□□ 0.47
KNTC1P50748 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.98■□□□□ 0.47
KNTC1P50748 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.98■□□□□ 0.47
KNTC1P50748 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.97■□□□□ 0.47
KNTC1P50748 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KNTC1P50748 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KNTC1P50748 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KNTC1P50748 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KNTC1P50748 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KNTC1P50748 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KNTC1P50748 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
KNTC1P50748 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.97■□□□□ 0.47
KNTC1P50748 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KNTC1P50748 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms