Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.08■□□□□ 0.64
CCNFP41002 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.08■□□□□ 0.64
CCNFP41002 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCNFP41002 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.08■□□□□ 0.64
CCNFP41002 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCNFP41002 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCNFP41002 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.08■□□□□ 0.64
CCNFP41002 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCNFP41002 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCNFP41002 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNFP41002 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.07■□□□□ 0.64
CCNFP41002 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNFP41002 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCNFP41002 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNFP41002 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCNFP41002 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNFP41002 ABHD17AP1-201ENST00000358206 933 ntBASIC19.07■□□□□ 0.64
CCNFP41002 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCNFP41002 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.07■□□□□ 0.64
CCNFP41002 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.07■□□□□ 0.64
CCNFP41002 KRASP1-201ENST00000407852 552 ntBASIC19.07■□□□□ 0.64
CCNFP41002 TUBB8P6-201ENST00000436895 1288 ntBASIC19.07■□□□□ 0.64
CCNFP41002 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CCNFP41002 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.07■□□□□ 0.64
CCNFP41002 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCNFP41002 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCNFP41002 ANO7L1-203ENST00000602586 1720 ntBASIC19.07■□□□□ 0.64
CCNFP41002 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CCNFP41002 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNFP41002 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNFP41002 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.07■□□□□ 0.64
CCNFP41002 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCNFP41002 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNFP41002 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNFP41002 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CCNFP41002 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 C1QBPP2-201ENST00000528754 825 ntBASIC19.06■□□□□ 0.64
CCNFP41002 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.06■□□□□ 0.64
CCNFP41002 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 AC124016.1-201ENST00000609552 612 ntBASIC19.06■□□□□ 0.64
CCNFP41002 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNFP41002 NOC2LP1-202ENST00000452600 2235 ntBASIC19.06■□□□□ 0.64
CCNFP41002 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CCNFP41002 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNFP41002 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNFP41002 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNFP41002 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNFP41002 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNFP41002 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNFP41002 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNFP41002 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNFP41002 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNFP41002 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNFP41002 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.05■□□□□ 0.64
CCNFP41002 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNFP41002 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCNFP41002 AC110285.5-201ENST00000611501 352 ntBASIC19.05■□□□□ 0.64
CCNFP41002 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.05■□□□□ 0.64
CCNFP41002 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNFP41002 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.05■□□□□ 0.64
CCNFP41002 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCNFP41002 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNFP41002 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNFP41002 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCNFP41002 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNFP41002 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCNFP41002 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCNFP41002 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCNFP41002 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNFP41002 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms