Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCNN1AP37088 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 MMP23A-201ENST00000234610 1017 ntBASIC19.74■□□□□ 0.75
SCNN1AP37088 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCNN1AP37088 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCNN1AP37088 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 CCR12P-201ENST00000446203 998 ntBASIC19.74■□□□□ 0.75
SCNN1AP37088 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.74■□□□□ 0.75
SCNN1AP37088 EGLN1P1-201ENST00000531623 762 ntBASIC19.74■□□□□ 0.75
SCNN1AP37088 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCNN1AP37088 AL353719.1-201ENST00000566847 864 ntBASIC19.74■□□□□ 0.75
SCNN1AP37088 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.74■□□□□ 0.75
SCNN1AP37088 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SCNN1AP37088 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.74■□□□□ 0.75
SCNN1AP37088 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 AC092338.2-201ENST00000568827 1415 ntBASIC19.74■□□□□ 0.75
SCNN1AP37088 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.74■□□□□ 0.75
SCNN1AP37088 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.74■□□□□ 0.75
SCNN1AP37088 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCNN1AP37088 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.73■□□□□ 0.75
SCNN1AP37088 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.73■□□□□ 0.75
SCNN1AP37088 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SCNN1AP37088 Z98044.1-201ENST00000632503 1764 ntBASIC19.73■□□□□ 0.75
SCNN1AP37088 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.73■□□□□ 0.75
SCNN1AP37088 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.73■□□□□ 0.75
SCNN1AP37088 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.73■□□□□ 0.75
SCNN1AP37088 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SCNN1AP37088 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.73■□□□□ 0.75
SCNN1AP37088 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.73■□□□□ 0.75
SCNN1AP37088 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.73■□□□□ 0.75
SCNN1AP37088 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.73■□□□□ 0.75
SCNN1AP37088 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.73■□□□□ 0.75
SCNN1AP37088 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.73■□□□□ 0.75
SCNN1AP37088 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCNN1AP37088 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCNN1AP37088 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCNN1AP37088 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SCNN1AP37088 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.72■□□□□ 0.75
SCNN1AP37088 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCNN1AP37088 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCNN1AP37088 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.72■□□□□ 0.75
SCNN1AP37088 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.72■□□□□ 0.75
SCNN1AP37088 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.72■□□□□ 0.75
SCNN1AP37088 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.72■□□□□ 0.75
SCNN1AP37088 AC116562.4-202ENST00000641738 218 ntBASIC19.72■□□□□ 0.75
SCNN1AP37088 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCNN1AP37088 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCNN1AP37088 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 RCC2P3-201ENST00000418112 1537 ntBASIC19.71■□□□□ 0.75
SCNN1AP37088 MTMR9LP-203ENST00000426597 1545 ntBASIC19.71■□□□□ 0.75
SCNN1AP37088 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SCNN1AP37088 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.71■□□□□ 0.75
SCNN1AP37088 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SCNN1AP37088 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 AL023284.2-201ENST00000405850 579 ntBASIC19.71■□□□□ 0.75
SCNN1AP37088 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 BX088651.1-201ENST00000540551 451 ntBASIC19.71■□□□□ 0.75
SCNN1AP37088 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.71■□□□□ 0.75
SCNN1AP37088 AC010653.2-201ENST00000623505 997 ntBASIC19.71■□□□□ 0.75
SCNN1AP37088 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.71■□□□□ 0.75
SCNN1AP37088 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SCNN1AP37088 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.71■□□□□ 0.75
SCNN1AP37088 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCNN1AP37088 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
SCNN1AP37088 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCNN1AP37088 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCNN1AP37088 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.7■□□□□ 0.74
SCNN1AP37088 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SCNN1AP37088 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCNN1AP37088 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms