Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN1P35523 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCN1P35523 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCN1P35523 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CLCN1P35523 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCN1P35523 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.56■■□□□ 1.04
CLCN1P35523 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.56■■□□□ 1.04
CLCN1P35523 AC105020.6-201ENST00000621523 1217 ntBASIC21.56■■□□□ 1.04
CLCN1P35523 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN1P35523 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CLCN1P35523 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CLCN1P35523 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCN1P35523 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.55■■□□□ 1.04
CLCN1P35523 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CLCN1P35523 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.55■■□□□ 1.04
CLCN1P35523 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCN1P35523 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.55■■□□□ 1.04
CLCN1P35523 AC026185.1-201ENST00000445748 174 ntBASIC21.55■■□□□ 1.04
CLCN1P35523 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.55■■□□□ 1.04
CLCN1P35523 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.55■■□□□ 1.04
CLCN1P35523 AC133552.2-202ENST00000575694 574 ntBASIC21.55■■□□□ 1.04
CLCN1P35523 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.55■■□□□ 1.04
CLCN1P35523 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 AL645608.8-201ENST00000606034 2086 ntBASIC21.55■■□□□ 1.04
CLCN1P35523 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CLCN1P35523 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN1P35523 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCN1P35523 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.54■■□□□ 1.04
CLCN1P35523 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCN1P35523 CROCCP5-201ENST00000436658 830 ntBASIC21.54■■□□□ 1.04
CLCN1P35523 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CLCN1P35523 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CLCN1P35523 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.54■■□□□ 1.04
CLCN1P35523 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 PTBP1P-201ENST00000554374 1601 ntBASIC21.54■■□□□ 1.04
CLCN1P35523 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CLCN1P35523 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN1P35523 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCN1P35523 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCN1P35523 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCN1P35523 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.53■■□□□ 1.04
CLCN1P35523 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CLCN1P35523 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CLCN1P35523 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.53■■□□□ 1.04
CLCN1P35523 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms