Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CKS2P33552 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.97□□□□□ -0.17
CKS2P33552 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CKS2P33552 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CKS2P33552 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CKS2P33552 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.96□□□□□ -0.17
CKS2P33552 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CKS2P33552 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.96□□□□□ -0.17
CKS2P33552 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CKS2P33552 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.96□□□□□ -0.17
CKS2P33552 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.96□□□□□ -0.17
CKS2P33552 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.96□□□□□ -0.17
CKS2P33552 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CKS2P33552 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.96□□□□□ -0.17
CKS2P33552 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.96□□□□□ -0.17
CKS2P33552 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CKS2P33552 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS2P33552 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS2P33552 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS2P33552 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS2P33552 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CKS2P33552 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS2P33552 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CKS2P33552 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CKS2P33552 ANO7L1-203ENST00000602586 1720 ntBASIC13.95□□□□□ -0.18
CKS2P33552 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.95□□□□□ -0.18
CKS2P33552 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS2P33552 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.95□□□□□ -0.18
CKS2P33552 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.95□□□□□ -0.18
CKS2P33552 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.95□□□□□ -0.18
CKS2P33552 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CKS2P33552 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CKS2P33552 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CKS2P33552 MIR939-201ENST00000401314 82 ntBASIC13.95□□□□□ -0.18
CKS2P33552 AF213884.3-201ENST00000563833 479 ntBASIC13.95□□□□□ -0.18
CKS2P33552 AL591742.1-201ENST00000604433 565 ntBASIC13.95□□□□□ -0.18
CKS2P33552 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.95□□□□□ -0.18
CKS2P33552 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CKS2P33552 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS2P33552 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS2P33552 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS2P33552 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.95□□□□□ -0.18
CKS2P33552 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.95□□□□□ -0.18
CKS2P33552 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CKS2P33552 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS2P33552 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.95□□□□□ -0.18
CKS2P33552 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CKS2P33552 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CKS2P33552 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.94□□□□□ -0.18
CKS2P33552 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.94□□□□□ -0.18
CKS2P33552 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms