Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA11P31270 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA11P31270 SPDYE15P-201ENST00000424157 909 ntBASIC20.53■□□□□ 0.88
HOXA11P31270 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA11P31270 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HOXA11P31270 AC091076.1-201ENST00000610741 619 ntBASIC20.53■□□□□ 0.88
HOXA11P31270 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA11P31270 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA11P31270 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA11P31270 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA11P31270 FP475955.4-201ENST00000623131 1990 ntBASIC20.53■□□□□ 0.88
HOXA11P31270 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA11P31270 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HOXA11P31270 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA11P31270 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HOXA11P31270 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA11P31270 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA11P31270 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA11P31270 AL109659.2-201ENST00000606809 1674 ntBASIC20.52■□□□□ 0.88
HOXA11P31270 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
HOXA11P31270 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
HOXA11P31270 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA11P31270 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.52■□□□□ 0.88
HOXA11P31270 AC112907.2-201ENST00000448639 330 ntBASIC20.52■□□□□ 0.88
HOXA11P31270 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXA11P31270 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.52■□□□□ 0.88
HOXA11P31270 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXA11P31270 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXA11P31270 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HOXA11P31270 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.52■□□□□ 0.87
HOXA11P31270 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HOXA11P31270 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXA11P31270 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HOXA11P31270 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA11P31270 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HOXA11P31270 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXA11P31270 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXA11P31270 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA11P31270 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 AC024243.1-201ENST00000609234 778 ntBASIC20.51■□□□□ 0.87
HOXA11P31270 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 RCC2P3-201ENST00000418112 1537 ntBASIC20.51■□□□□ 0.87
HOXA11P31270 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 AC008556.1-201ENST00000610908 2040 ntBASIC20.51■□□□□ 0.87
HOXA11P31270 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA11P31270 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXA11P31270 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 KRT8P32-201ENST00000512863 1461 ntBASIC20.5■□□□□ 0.87
HOXA11P31270 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.5■□□□□ 0.87
HOXA11P31270 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA11P31270 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HOXA11P31270 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXA11P31270 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXA11P31270 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA11P31270 AC083849.1-201ENST00000615227 514 ntBASIC20.5■□□□□ 0.87
HOXA11P31270 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HOXA11P31270 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA11P31270 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA11P31270 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
HOXA11P31270 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXA11P31270 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA11P31270 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
HOXA11P31270 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HOXA11P31270 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA11P31270 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA11P31270 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXA11P31270 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
HOXA11P31270 PCED1CP-201ENST00000419887 785 ntBASIC20.49■□□□□ 0.87
HOXA11P31270 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA11P31270 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXA11P31270 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA11P31270 AP000550.4-202ENST00000639755 178 ntBASIC20.49■□□□□ 0.87
HOXA11P31270 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXA11P31270 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HOXA11P31270 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXA11P31270 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
HOXA11P31270 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HOXA11P31270 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HOXA11P31270 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXA11P31270 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXA11P31270 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXA11P31270 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HOXA11P31270 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms