Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.02■□□□□ 0.16
COL8A2P25067 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.02■□□□□ 0.16
COL8A2P25067 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.02■□□□□ 0.16
COL8A2P25067 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.02■□□□□ 0.16
COL8A2P25067 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.02■□□□□ 0.16
COL8A2P25067 WWOX-216ENST00000569818 525 ntBASIC16.02■□□□□ 0.16
COL8A2P25067 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL8A2P25067 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL8A2P25067 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.02■□□□□ 0.15
COL8A2P25067 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.02■□□□□ 0.15
COL8A2P25067 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL8A2P25067 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL8A2P25067 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.01■□□□□ 0.15
COL8A2P25067 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.01■□□□□ 0.15
COL8A2P25067 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
COL8A2P25067 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COL8A2P25067 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
COL8A2P25067 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.01■□□□□ 0.15
COL8A2P25067 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
COL8A2P25067 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.01■□□□□ 0.15
COL8A2P25067 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.01■□□□□ 0.15
COL8A2P25067 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.01■□□□□ 0.15
COL8A2P25067 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
COL8A2P25067 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
COL8A2P25067 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 Z82202.1-201ENST00000623446 1880 ntBASIC16.01■□□□□ 0.15
COL8A2P25067 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 KRT8P45-201ENST00000414328 1447 ntBASIC16.01■□□□□ 0.15
COL8A2P25067 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.01■□□□□ 0.15
COL8A2P25067 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
COL8A2P25067 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
COL8A2P25067 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.01■□□□□ 0.15
COL8A2P25067 AC116562.4-201ENST00000641316 2276 ntBASIC16.01■□□□□ 0.15
COL8A2P25067 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.01■□□□□ 0.15
COL8A2P25067 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL8A2P25067 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COL8A2P25067 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COL8A2P25067 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16■□□□□ 0.15
COL8A2P25067 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16■□□□□ 0.15
COL8A2P25067 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16■□□□□ 0.15
COL8A2P25067 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
COL8A2P25067 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
COL8A2P25067 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16■□□□□ 0.15
COL8A2P25067 COX11P1-201ENST00000489116 835 ntBASIC16■□□□□ 0.15
COL8A2P25067 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
COL8A2P25067 AL512604.3-201ENST00000569583 964 ntBASIC16■□□□□ 0.15
COL8A2P25067 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16■□□□□ 0.15
COL8A2P25067 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16■□□□□ 0.15
COL8A2P25067 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
COL8A2P25067 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COL8A2P25067 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL8A2P25067 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
COL8A2P25067 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.99■□□□□ 0.15
COL8A2P25067 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.99■□□□□ 0.15
COL8A2P25067 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL8A2P25067 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
COL8A2P25067 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
COL8A2P25067 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.99■□□□□ 0.15
COL8A2P25067 YBX1P2-201ENST00000489612 999 ntBASIC15.99■□□□□ 0.15
COL8A2P25067 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.99■□□□□ 0.15
COL8A2P25067 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.99■□□□□ 0.15
COL8A2P25067 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.99■□□□□ 0.15
COL8A2P25067 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.99■□□□□ 0.15
COL8A2P25067 AC008622.2-201ENST00000617006 1229 ntBASIC15.99■□□□□ 0.15
COL8A2P25067 AC011558.1-201ENST00000623459 338 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms