Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFX1P22670 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.64■□□□□ 0.9
RFX1P22670 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFX1P22670 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFX1P22670 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.64■□□□□ 0.9
RFX1P22670 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
RFX1P22670 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX1P22670 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX1P22670 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RFX1P22670 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.64■□□□□ 0.89
RFX1P22670 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.64■□□□□ 0.89
RFX1P22670 NTF6B-201ENST00000591913 560 ntBASIC20.64■□□□□ 0.89
RFX1P22670 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX1P22670 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFX1P22670 AC006333.2-201ENST00000607957 2099 ntBASIC20.63■□□□□ 0.89
RFX1P22670 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX1P22670 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 KRT8P9-201ENST00000558927 1449 ntBASIC20.63■□□□□ 0.89
RFX1P22670 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
RFX1P22670 AL020996.1-203ENST00000536896 2307 ntBASIC20.63■□□□□ 0.89
RFX1P22670 LIN28AP1-201ENST00000429574 405 ntBASIC20.63■□□□□ 0.89
RFX1P22670 ATP5G1P1-201ENST00000448724 379 ntBASIC20.63■□□□□ 0.89
RFX1P22670 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.63■□□□□ 0.89
RFX1P22670 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.63■□□□□ 0.89
RFX1P22670 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.63■□□□□ 0.89
RFX1P22670 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX1P22670 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.63■□□□□ 0.89
RFX1P22670 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX1P22670 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX1P22670 CROCCP3-202ENST00000420820 1947 ntBASIC20.63■□□□□ 0.89
RFX1P22670 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RFX1P22670 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX1P22670 AC079598.2-202ENST00000546624 1451 ntBASIC20.62■□□□□ 0.89
RFX1P22670 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RFX1P22670 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RFX1P22670 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX1P22670 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RFX1P22670 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.62■□□□□ 0.89
RFX1P22670 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX1P22670 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.62■□□□□ 0.89
RFX1P22670 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RFX1P22670 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX1P22670 REXO1L10P-201ENST00000615707 1290 ntBASIC20.62■□□□□ 0.89
RFX1P22670 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX1P22670 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX1P22670 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX1P22670 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX1P22670 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
RFX1P22670 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX1P22670 AC004408.2-201ENST00000623613 2777 ntBASIC20.61■□□□□ 0.89
RFX1P22670 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RFX1P22670 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RFX1P22670 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.61■□□□□ 0.89
RFX1P22670 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.61■□□□□ 0.89
RFX1P22670 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.61■□□□□ 0.89
RFX1P22670 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.61■□□□□ 0.89
RFX1P22670 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.61■□□□□ 0.89
RFX1P22670 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.61■□□□□ 0.89
RFX1P22670 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms