Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.66■□□□□ 0.26
ATF1P18846 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
ATF1P18846 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
ATF1P18846 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 MIR935-201ENST00000401179 91 ntBASIC16.66■□□□□ 0.26
ATF1P18846 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.66■□□□□ 0.26
ATF1P18846 NCF1B-203ENST00000435988 1254 ntBASIC16.66■□□□□ 0.26
ATF1P18846 YBX1P10-201ENST00000444752 975 ntBASIC16.66■□□□□ 0.26
ATF1P18846 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.66■□□□□ 0.26
ATF1P18846 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.66■□□□□ 0.26
ATF1P18846 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.66■□□□□ 0.26
ATF1P18846 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.66■□□□□ 0.26
ATF1P18846 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.66■□□□□ 0.26
ATF1P18846 HLA-B-256ENST00000639848 1089 ntBASIC16.66■□□□□ 0.26
ATF1P18846 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.66■□□□□ 0.26
ATF1P18846 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.66■□□□□ 0.26
ATF1P18846 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.66■□□□□ 0.26
ATF1P18846 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.66■□□□□ 0.26
ATF1P18846 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATF1P18846 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.65■□□□□ 0.26
ATF1P18846 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
ATF1P18846 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATF1P18846 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATF1P18846 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 KRT8P8-201ENST00000434750 1448 ntBASIC16.65■□□□□ 0.26
ATF1P18846 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.65■□□□□ 0.26
ATF1P18846 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATF1P18846 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.65■□□□□ 0.26
ATF1P18846 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.65■□□□□ 0.26
ATF1P18846 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.65■□□□□ 0.26
ATF1P18846 MYC-209ENST00000641252 345 ntBASIC16.65■□□□□ 0.26
ATF1P18846 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.65■□□□□ 0.26
ATF1P18846 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATF1P18846 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATF1P18846 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.64■□□□□ 0.25
ATF1P18846 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
ATF1P18846 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.64■□□□□ 0.25
ATF1P18846 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.64■□□□□ 0.25
ATF1P18846 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.64■□□□□ 0.25
ATF1P18846 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.64■□□□□ 0.25
ATF1P18846 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.64■□□□□ 0.25
ATF1P18846 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.64■□□□□ 0.25
ATF1P18846 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.64■□□□□ 0.25
ATF1P18846 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.64■□□□□ 0.25
ATF1P18846 AC060766.5-201ENST00000590539 871 ntBASIC16.64■□□□□ 0.25
ATF1P18846 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.64■□□□□ 0.25
ATF1P18846 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ATF1P18846 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATF1P18846 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.64■□□□□ 0.25
ATF1P18846 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATF1P18846 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms