Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPRP12270 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPRP12270 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPRP12270 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPRP12270 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPRP12270 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TPRP12270 VENTXP7-201ENST00000475503 772 ntBASIC17.79■□□□□ 0.44
TPRP12270 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TPRP12270 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TPRP12270 AC040169.1-201ENST00000565382 521 ntBASIC17.79■□□□□ 0.44
TPRP12270 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.79■□□□□ 0.44
TPRP12270 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TPRP12270 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.79■□□□□ 0.44
TPRP12270 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.79■□□□□ 0.44
TPRP12270 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.78■□□□□ 0.44
TPRP12270 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPRP12270 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPRP12270 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPRP12270 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.78■□□□□ 0.44
TPRP12270 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.78■□□□□ 0.44
TPRP12270 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.78■□□□□ 0.44
TPRP12270 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.78■□□□□ 0.44
TPRP12270 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPRP12270 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.78■□□□□ 0.44
TPRP12270 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TPRP12270 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.78■□□□□ 0.44
TPRP12270 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.78■□□□□ 0.44
TPRP12270 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPRP12270 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.78■□□□□ 0.44
TPRP12270 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPRP12270 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TPRP12270 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TPRP12270 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.77■□□□□ 0.44
TPRP12270 AC005225.4-201ENST00000557330 545 ntBASIC17.77■□□□□ 0.44
TPRP12270 BNIP3P18-201ENST00000593976 575 ntBASIC17.77■□□□□ 0.44
TPRP12270 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.77■□□□□ 0.44
TPRP12270 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TPRP12270 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 AL121603.2-201ENST00000557373 2117 ntBASIC17.77■□□□□ 0.44
TPRP12270 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.77■□□□□ 0.44
TPRP12270 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TPRP12270 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.77■□□□□ 0.44
TPRP12270 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.77■□□□□ 0.44
TPRP12270 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.77■□□□□ 0.44
TPRP12270 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TPRP12270 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPRP12270 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPRP12270 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPRP12270 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
TPRP12270 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TPRP12270 AC063926.2-201ENST00000623766 1308 ntBASIC17.77■□□□□ 0.43
TPRP12270 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.76■□□□□ 0.43
TPRP12270 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.76■□□□□ 0.43
TPRP12270 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TPRP12270 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.76■□□□□ 0.43
TPRP12270 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.76■□□□□ 0.43
TPRP12270 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.76■□□□□ 0.43
TPRP12270 AC005336.2-201ENST00000593183 939 ntBASIC17.76■□□□□ 0.43
TPRP12270 AL355877.3-201ENST00000622820 899 ntBASIC17.76■□□□□ 0.43
TPRP12270 AC079602.3-201ENST00000623931 403 ntBASIC17.76■□□□□ 0.43
TPRP12270 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.76■□□□□ 0.43
TPRP12270 HLA-J-201ENST00000462773 1622 ntBASIC17.76■□□□□ 0.43
TPRP12270 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TPRP12270 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.76■□□□□ 0.43
TPRP12270 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.76■□□□□ 0.43
TPRP12270 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.76■□□□□ 0.43
TPRP12270 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.76■□□□□ 0.43
TPRP12270 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 MEIS3P1-201ENST00000495167 958 ntBASIC17.76■□□□□ 0.43
TPRP12270 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TPRP12270 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.76■□□□□ 0.43
TPRP12270 SNHG9-202ENST00000564014 471 ntBASIC17.76■□□□□ 0.43
TPRP12270 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.76■□□□□ 0.43
TPRP12270 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TPRP12270 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.76■□□□□ 0.43
TPRP12270 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPRP12270 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms