Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CYP3A4P08684 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.34■■□□□ 1.01
CYP3A4P08684 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.33■■□□□ 1.01
CYP3A4P08684 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.33■■□□□ 1.01
CYP3A4P08684 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.33■■□□□ 1.01
CYP3A4P08684 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.33■■□□□ 1.01
CYP3A4P08684 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
CYP3A4P08684 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CYP3A4P08684 NEK4P2-201ENST00000580004 1012 ntBASIC21.33■■□□□ 1.01
CYP3A4P08684 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CYP3A4P08684 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CYP3A4P08684 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.33■■□□□ 1
CYP3A4P08684 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.33■■□□□ 1
CYP3A4P08684 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.33■■□□□ 1
CYP3A4P08684 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.33■■□□□ 1
CYP3A4P08684 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CYP3A4P08684 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CYP3A4P08684 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CYP3A4P08684 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.32■■□□□ 1
CYP3A4P08684 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.32■■□□□ 1
CYP3A4P08684 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CYP3A4P08684 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CYP3A4P08684 AC117947.1-201ENST00000427448 529 ntBASIC21.32■■□□□ 1
CYP3A4P08684 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CYP3A4P08684 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.32■■□□□ 1
CYP3A4P08684 COX11P1-201ENST00000489116 835 ntBASIC21.32■■□□□ 1
CYP3A4P08684 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.32■■□□□ 1
CYP3A4P08684 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.32■■□□□ 1
CYP3A4P08684 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.32■■□□□ 1
CYP3A4P08684 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.32■■□□□ 1
CYP3A4P08684 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.32■■□□□ 1
CYP3A4P08684 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.31■■□□□ 1
CYP3A4P08684 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CYP3A4P08684 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.31■■□□□ 1
CYP3A4P08684 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.31■■□□□ 1
CYP3A4P08684 AC009947.2-201ENST00000444014 672 ntBASIC21.31■■□□□ 1
CYP3A4P08684 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.31■■□□□ 1
CYP3A4P08684 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.31■■□□□ 1
CYP3A4P08684 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CYP3A4P08684 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
CYP3A4P08684 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.31■■□□□ 1
CYP3A4P08684 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CYP3A4P08684 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
CYP3A4P08684 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CYP3A4P08684 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.3■■□□□ 1
CYP3A4P08684 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CYP3A4P08684 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 AC008556.1-201ENST00000610908 2040 ntBASIC21.3■■□□□ 1
CYP3A4P08684 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CYP3A4P08684 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms