Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSDP07339 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTSDP07339 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSDP07339 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSDP07339 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.77■□□□□ 0.11
CTSDP07339 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTSDP07339 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTSDP07339 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CTSDP07339 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.76■□□□□ 0.11
CTSDP07339 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CTSDP07339 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.76■□□□□ 0.11
CTSDP07339 AP006587.1-201ENST00000534129 1502 ntBASIC15.76■□□□□ 0.11
CTSDP07339 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.76■□□□□ 0.11
CTSDP07339 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.76■□□□□ 0.11
CTSDP07339 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CTSDP07339 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CTSDP07339 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CTSDP07339 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 AC067852.2-201ENST00000590513 2313 ntBASIC15.76■□□□□ 0.11
CTSDP07339 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTSDP07339 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.76■□□□□ 0.11
CTSDP07339 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CTSDP07339 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CTSDP07339 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.75■□□□□ 0.11
CTSDP07339 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSDP07339 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSDP07339 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSDP07339 AC007322.1-201ENST00000426983 750 ntBASIC15.75■□□□□ 0.11
CTSDP07339 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.75■□□□□ 0.11
CTSDP07339 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.75■□□□□ 0.11
CTSDP07339 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.75■□□□□ 0.11
CTSDP07339 AC126763.1-201ENST00000552015 2118 ntBASIC15.75■□□□□ 0.11
CTSDP07339 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.75■□□□□ 0.11
CTSDP07339 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.75■□□□□ 0.11
CTSDP07339 AC005829.2-201ENST00000571422 1056 ntBASIC15.75■□□□□ 0.11
CTSDP07339 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.75■□□□□ 0.11
CTSDP07339 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 AC011767.1-201ENST00000617410 1153 ntBASIC15.75■□□□□ 0.11
CTSDP07339 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.75■□□□□ 0.11
CTSDP07339 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.75■□□□□ 0.11
CTSDP07339 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTSDP07339 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CTSDP07339 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CTSDP07339 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSDP07339 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.74■□□□□ 0.11
CTSDP07339 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSDP07339 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.74■□□□□ 0.11
CTSDP07339 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTSDP07339 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSDP07339 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CTSDP07339 AC008764.6-201ENST00000595909 2069 ntBASIC15.74■□□□□ 0.11
CTSDP07339 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTSDP07339 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSDP07339 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.74■□□□□ 0.11
CTSDP07339 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSDP07339 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.74■□□□□ 0.11
CTSDP07339 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.74■□□□□ 0.11
CTSDP07339 AC093787.1-201ENST00000450396 207 ntBASIC15.74■□□□□ 0.11
CTSDP07339 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSDP07339 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTSDP07339 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTSDP07339 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.73■□□□□ 0.11
CTSDP07339 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTSDP07339 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms