Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA1P02647 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA1P02647 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
APOA1P02647 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOA1P02647 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.9■□□□□ 0.3
APOA1P02647 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.9■□□□□ 0.3
APOA1P02647 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.9■□□□□ 0.3
APOA1P02647 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.9■□□□□ 0.3
APOA1P02647 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.9■□□□□ 0.3
APOA1P02647 AL354811.1-201ENST00000610286 706 ntBASIC16.9■□□□□ 0.3
APOA1P02647 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
APOA1P02647 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.9■□□□□ 0.3
APOA1P02647 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.9■□□□□ 0.3
APOA1P02647 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.9■□□□□ 0.3
APOA1P02647 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
APOA1P02647 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
APOA1P02647 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.9■□□□□ 0.3
APOA1P02647 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOA1P02647 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.9■□□□□ 0.3
APOA1P02647 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
APOA1P02647 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
APOA1P02647 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
APOA1P02647 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
APOA1P02647 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 ESPNP-201ENST00000270691 2015 ntBASIC16.89■□□□□ 0.29
APOA1P02647 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.89■□□□□ 0.29
APOA1P02647 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.89■□□□□ 0.29
APOA1P02647 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.89■□□□□ 0.29
APOA1P02647 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.89■□□□□ 0.29
APOA1P02647 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.89■□□□□ 0.29
APOA1P02647 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.89■□□□□ 0.29
APOA1P02647 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.89■□□□□ 0.29
APOA1P02647 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.89■□□□□ 0.29
APOA1P02647 FP475955.4-201ENST00000623131 1990 ntBASIC16.89■□□□□ 0.29
APOA1P02647 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
APOA1P02647 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APOA1P02647 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APOA1P02647 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.89■□□□□ 0.29
APOA1P02647 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.89■□□□□ 0.29
APOA1P02647 AC008764.6-201ENST00000595909 2069 ntBASIC16.89■□□□□ 0.29
APOA1P02647 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
APOA1P02647 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
APOA1P02647 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.88■□□□□ 0.29
APOA1P02647 KRT8P20-201ENST00000423953 1409 ntBASIC16.88■□□□□ 0.29
APOA1P02647 AC084018.2-201ENST00000613093 2607 ntBASIC16.88■□□□□ 0.29
APOA1P02647 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
APOA1P02647 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
APOA1P02647 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.88■□□□□ 0.29
APOA1P02647 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APOA1P02647 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.88■□□□□ 0.29
APOA1P02647 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.88■□□□□ 0.29
APOA1P02647 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.88■□□□□ 0.29
APOA1P02647 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.88■□□□□ 0.29
APOA1P02647 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
APOA1P02647 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
APOA1P02647 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.88■□□□□ 0.29
APOA1P02647 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOA1P02647 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.88■□□□□ 0.29
APOA1P02647 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms