Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD3O95983 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3O95983 LSM12P1-201ENST00000411836 588 ntBASIC21.76■■□□□ 1.07
MBD3O95983 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD3O95983 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
MBD3O95983 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3O95983 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3O95983 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.76■■□□□ 1.07
MBD3O95983 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3O95983 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD3O95983 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD3O95983 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MBD3O95983 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD3O95983 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MBD3O95983 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
MBD3O95983 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.75■■□□□ 1.07
MBD3O95983 AC005829.2-201ENST00000571422 1056 ntBASIC21.75■■□□□ 1.07
MBD3O95983 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.75■■□□□ 1.07
MBD3O95983 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.75■■□□□ 1.07
MBD3O95983 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
MBD3O95983 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
MBD3O95983 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.75■■□□□ 1.07
MBD3O95983 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
MBD3O95983 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.75■■□□□ 1.07
MBD3O95983 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.75■■□□□ 1.07
MBD3O95983 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3O95983 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MBD3O95983 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.74■■□□□ 1.07
MBD3O95983 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.74■■□□□ 1.07
MBD3O95983 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.74■■□□□ 1.07
MBD3O95983 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.74■■□□□ 1.07
MBD3O95983 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.74■■□□□ 1.07
MBD3O95983 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.74■■□□□ 1.07
MBD3O95983 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
MBD3O95983 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 AC231657.2-201ENST00000624556 255 ntBASIC21.74■■□□□ 1.07
MBD3O95983 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.74■■□□□ 1.07
MBD3O95983 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.74■■□□□ 1.07
MBD3O95983 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
MBD3O95983 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MBD3O95983 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3O95983 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.74■■□□□ 1.07
MBD3O95983 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.73■■□□□ 1.07
MBD3O95983 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.73■■□□□ 1.07
MBD3O95983 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.73■■□□□ 1.07
MBD3O95983 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
MBD3O95983 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 AC034268.1-201ENST00000441047 882 ntBASIC21.73■■□□□ 1.07
MBD3O95983 AC093787.1-201ENST00000450396 207 ntBASIC21.73■■□□□ 1.07
MBD3O95983 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.73■■□□□ 1.07
MBD3O95983 AC011767.1-201ENST00000617410 1153 ntBASIC21.73■■□□□ 1.07
MBD3O95983 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.73■■□□□ 1.07
MBD3O95983 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
MBD3O95983 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MBD3O95983 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
MBD3O95983 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MBD3O95983 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3O95983 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
MBD3O95983 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 BCL2-203ENST00000589955 5011 ntBASIC21.72■■□□□ 1.07
MBD3O95983 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD3O95983 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
MBD3O95983 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MBD3O95983 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD3O95983 MIR638-201ENST00000385237 100 ntBASIC21.72■■□□□ 1.07
MBD3O95983 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.72■■□□□ 1.07
MBD3O95983 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms